Genomics vs Proteomics
Genomics
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Proteomics
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Genomics is the study of genome of an organism.
Genome represents the entire genes of an organism or a cell type
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Proteomics is the study of proteome of an organism.
Proteome refers to the entire protein set coded by the genome of an organism
or a cell type
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Genomics include mapping, sequencing and analysis of
genome
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Proteomics include characterization of all proteins
of an organism or study of structure and function of proteins
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Genomics can be broadly classified into structural
and functional genomics
a)Structural
genomics: is the study of the structure of all
genes and its relative position on the chromosome
b)Functional
genomics: study of function of all genes or the
role of these genes in regulating metabolic activities of the cell
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Proteomics can be classified into structural
functional and expression proteomics
a)Structural
proteomics: is the study of the structure of
proteins and their location in the cell
b)Functional
proteomics: study of function of all proteins
which primarily include protein-protein interaction and interaction of proteins
with other biomolecules
c) Expression
proteomics: is the study of identification and
quantification or expression level of
proteins of the cell at different developmental stages or at different
environmental conditions
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Techniques in genomics include
a) gene sequencing strategies like directed gene
sequencing, whole genome short gun sequencing,
b)Construction of ESTs (expressed sequence Tags),
c) Identification of single nucleotide polymorphisms
(SNPs),
d) Analysis and interpretation of sequenced data
using different databases and software.
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Techniques in proteomics include
a) protein extraction, electrophoretic separation,
digestion of separated proteins into small fragments using trypsin, mass spectroscopy
to find out amino acid sequences and finally protein identification using
standard databases.
b) Protein 3D structure prediction using software.
c) Protein expression study using protein
microarray.
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Thrust areas in Genomics: Genome Sequencing projects
of many organisms including Human Genome Project
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Proteome database development like SWISS-2D PAGE and
software development for computer aided drug design
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